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Metadatabase view - dataset: Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera)

General information

dataset entry ID:
FWM_31
name of the dataset:
full name of the dataset:
Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera)
dataset short name:
DS-POLYCSS Nearctic Polycentropodidae
type of dataset (more information):
others
specify:
Molecular data with voucher collection data
data type:
descriptive data
short description of the dataset/summary:
The BOLD dataset "DS-POLYCSS Nearctic Polycentropodidae (Trichoptera)" contains publicly accessible molecular data and associated voucher collection data. Data include two loci (nuclear 28s rRNA D2 and mitochondrial cytochrome oxidase C (COI)), specimen images, collection data, and additional specimen data. Data pertain to hundreds of treated specimens and dozens of treated species, of different life stages and both sexes, of the Trichoptera family Polycentropodidae in the Nearctic, with an emphasis on Polycentropus sensu lato. Data will continued to be added during continued systematic studies of the family by the authors.
keywords according to GCMD:
topic:
Biosphere, Biological Classification
ISO topic category according to ISO 19115:
Biota, Inland Waters
INSPIRE keywords according to GEMET:
Species distribution
own science keywords:
aquatic insects, Annulipalpia, biodiversity, DNA barcoding, phylogeny, taxonomy, Trichoptera
related project:
BOLD ORFIN - Nearctic Polycentropus sensu lato (Trichoptera: Polycentropodidae)
funding:
This work was supported by the McIntire-Stennis Program from the USDA National Institute of Food and Agriculture and by the USDA National Institute of Food and Agriculture, 1890 Institution Capacity Building Grant Project 1021805.

Technical and administrative specifications

data format:
others/specify
others/details:
Barcode of Life Database
operating system:
all operating systems
English
current access level:
web (public)
http://www.boldsystems.org/index.php/Public_SearchTerms?query=DS-POLYCSS
currently available through GBIF:
no
exchange planned:
no
data in data repository:
yes
specify repository:
BARCODE OF LIFE DATA SYSTEM v4
Do you plan to publish the data on the Freshwater Biodiversity Data Portal:
no
update level:
continuously updated, update planned
contact details:
metadata contact person:
first, last name:
Alexander
 
Orfinger
phone:
3862902505
email:
a.orfinger@ufl.edu
institution:
University of Florida / Florida A&M University
address:
113 Perry-Paige S
postal code, city:
32307
 
Tallahassee
Florida
country:
United States
technical contact person:
Alexander
 
Orfinger
3862902505
a.orfinger@ufl.edu
scientific contact person:
first, last name:
Alexander
 
Orfinger
phone:
3862902505
email:
a.orfinger@ufl.edu

Intellectual property rights and citation

BARCODE OF LIFE DATA SYSTEM v4 (BOLD)
dataset creator (data compiler):
contact name:
Alexander Orfinger
contact email:
a.orfinger@ufl.edu
contact institution:
University of Florida / Florida A&M University
data contributors to/owners of this dataset:
multiple
number:
3
data contributor/owner 1
contact name:
Alexander Orfinger
contact orcid:
0000-0002-4907-3150
contact position:

contact email:
a.orfinger@ufl.edu
contact institute:
University of Florida / Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

data contributor/owner 2
contact name:
Andrew Rasmussen
contact orcid:
N/A
contact position:

contact email:
andrew.rasmussen@famu.edu
contact institute:
Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

data contributor/owner 3
contact name:
Raymond Hix
contact orcid:
N/A
contact position:

contact email:
raymond.hix@famu.edu
contact institute:
Florida A&M University
contact country:
United States
criteria for using this part of the dataset:
The dataset is publicly available (data portal, data archive) and can be used without restrictions, but dataset creator/data contributors must be informed prior to publication. Data must be acknowledged and cited correctly.

citation of this dataset:
author(s):
Orfinger, A.B., Rasmussen, A.K. & Hix, R.L.
title and journal (name, number, pages):
Dataset - DS-POLYCSS Nearctic Polycentropodidae (Trichoptera), BARCODE OF LIFE DATA SYSTEM v4, 2021, accessible at http://www.boldsystems.org/index.php/Public_SearchTerms?query=DS-POLYCSS
year:
2021
doi (if applicable):
https://doi.org/10.5883/DS-POLYCSS
citation of the metadata:
author(s):
Orfinger, A.B., Rasmussen, A.K. & Hix, R.L.
title and journal (name, number, pages):
Multilocus BOLD Dataset for Nearctic Polycentropodidae (Trichoptera): Metadata. Freshwater Metadata Journal 51: 1-6
year:
2021
doi (if applicable):
https://doi.org/10.15504/fmj.2021.51

General data specifications

regional coverage of the dataset:
spatial extent of the dataset:
continental
continents:
North America
spatial extent (bounding coordinates):
southernmost latitude [°]:
10.7612000°
northernmost latitude [°]:
66.2282000°
westernmost longitude [°]:
-146.2500000°
easternmost longitude [°]:
-057.7410000°
        
countries:
North America: Canada, Costa Rica, Cuba, Dominican Republic, Mexico, United States
ecosystem type:
rivers, lakes/ponds, general freshwater
covered timeframe:
year from
1979
 
year to:
2021

Site specifications

coordinate system/grid data:
latitude/longitude, format: DD
datum (e.g. WGS84):
WGS84
grid data available:
yes
resolution:
10 - 100
unit:
m
 
number of sites:
100 - 1000
exact number of sites:
181
comments:
The number of sites is current as of February, 2021 but will increase as additional data are added.

Climate and environmental data

climate related data:
no climate data available
environmental data:
no environmental data per catchment available
available parameters per site:
information on riparian vegetation (incl. information on modification)
data source:
collector(s)
available parameters per site:
information on embankment (incl. information on modification)
data source:
collector(s)
available parameters per site:
information on channel form (incl. information on modification)
data source:
collector(s)
available parameters per site:
information on water uses (e.g., irrigation, fish ponds)
data source:
collector(s)
available parameters per site:
distance to the next main village/town upstream
data source:
collector(s)
available parameters per site:
stream order (according to Strahler)
data source:
collector(s)
available parameters per site:
altitude
data source:
collector(s)
available parameters per site:
information on instream habitat (incl. information on modification)
data source:
collector(s)
physico-chemical data:
no physico-chemical data available
stressors influencing the sites:
no stressor data available

Biological data

biological data origin:
from sampling
specify project:
various projects
specify method:
organism group addressed:
macro-invertebrates (Trichoptera)

Sample specifications/sample resolution

macro-invertebrates

sample information:
covered timeframe:

year from - to:
1979 - 2021
historical data:
yes
palaeo data:
no
season:
spring, summer, autumn, winter
temporal resolution/frequency of sampling:
infrequent sampling frequency
comments:
Data collection and input are ongoing.
taxonomic resolution:
order, family, sub-family, genus, species
percentage of species level data:
85
comments:
Specimens are identified to species when possible.
taxonomic coding:
taxalist according to:
Trichoptera Nearctica and Trichoptera World Checklist
reference(s):
- Rasmussen, A.K. & Morse, J.C., 2020. Distributional Checklist of Nearctic Trichoptera (Fall 2020 Revision). Unpublished, Florida A&M University, Tallahassee. 517 pp. [Available at http://www.Trichoptera.org] - Morse, J.C. (ed.), 2021. Trichoptera World Checklist. http://entweb.clemson.edu/database/trichopt/index.htm
sample specifications:
qualitative, presence/absence
replicate samples:
yes
specification of method(s) used for sampling and sorting:
Sampling methods varied according to life stage and collector. Collection method data are available within the individual specimens' "Specimen Page" when known. Collection methods included UV light trapping, sweep netting, malaise trapping, and emergence trapping for adults, and hand picking and standard benthic collecting methods for immature stages.

Other specifications

GIS layers, shape files related to the dataset:
no data available
availability of photos:
yes
availability of maps:
yes
quality control procedures:
Were any quality control procedures applied to your dataset?
yes
quality control protocols and comments:
Standard BOLD quality assurance procedures.
reference(s):
http://www.boldsystems.org/libhtml_v3/static/BOLD4_Documentation_Draft1.pdf
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